BacArena (version 1.8.2)

findInArena: Function for searching a keyword in arena organisms and media

Description

The generic function findInArena tries to find information (e.g. full names) about a specific keyword

Usage

findInArena(object, pattern, search_rea = TRUE, search_sub = TRUE)
# S4 method for Arena
findInArena(object, pattern, search_rea = TRUE, search_sub = TRUE)

Arguments

object

An object of class Arena.

pattern

A pattern for searching

search_rea

Only search for reactions

search_sub

Only search for substances

Examples

# NOT RUN {
data(Ec_core)
bac <- Bac(Ec_core)
arena <- Arena(n=20,m=20)
arena <- addOrg(arena,bac,amount=10)
findInArena(arena, "acetate")
# }