BacArena (version 1.8.2)

getSublb: Function for calculated the substrate concentration for every organism

Description

The generic function getSublb calculates the substrate concentration for every individual in the environment based on their x and y position.

Usage

getSublb(object)
# S4 method for Arena
getSublb(object)

Arguments

object

An object of class Arena.

Value

Returns the substrate concentration for every individual in the environment with substrates as well as x and y positions as columns and rows for each organism.

See Also

Arena-class

Examples

# NOT RUN {
data(Ec_core, envir = environment()) #get Escherichia coli core metabolic model
bac <- Bac(Ec_core,deathrate=0.05,
           minweight=0.05,growtype="exponential") #initialize a bacterium
arena <- Arena(n=20,m=20) #initialize the environment
arena <- addOrg(arena,bac,amount=10) #add 10 organisms
arena <- addSubs(arena,40) #add all possible substances
sublb <- getSublb(arena)
# }