plotSubUsage

An object of class Eval or a list with objects of class Eval.

simlist

subs

Total values below cutoff will be dismissed

cutoff

Set true if data should be returned

ret_data

The generic function <code>plotSubUsage</code> displays for given substances the quantities of absorption and production for each species

Can be used for simulation of organisms living in
communities (Bauer and Zimmermann (2017) <doi:10.1371/journal.pcbi.1005544>).
Each organism is represented individually and genome scale
metabolic models determine the uptake and release of compounds. Biological
processes such as movement, diffusion, chemotaxis and kinetics are available
along with data analysis techniques.

plotSubUsage: Function to plot usage of substances species wise

Description

Usage

Arguments

Details