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Blend

Robust Bayesian Longitudinal Regularized Semiparametric Mixed Models

Our recently developed fully robust Bayesian semiparametric mixed-effect model for high-dimensional longitudinal studies with heterogeneous observations can be implemented through this package. This model can distinguish between time-varying interactions and constant-effect-only cases to avoid model misspecifications. Facilitated by spike-and-slab priors, this model leads to superior performance in estimation, identification and statistical inference. In particular, robust Bayesian inferences in terms of valid Bayesian credible intervals on both parametric and nonparametric effects can be validated on finite samples. The Markov chain Monte Carlo algorithms of the proposed and alternative models are efficiently implemented in 'C++'.

How to install

  • To install from github, run these two lines of code in R
install.packages("devtools")
devtools::install_github("kunfa/Blend")
  • Released versions of Blend are available on CRAN (link), and can be installed within R via
install.packages("Blend")

Examples

Example.1 (default method)

library(Blend)
data(dat)

fit = Blend(y,x,t,J,kn,degree) 
fit$coefficient 
Coverage(fit)
plot_Blend(fit,sparse=TRUE)

Example.2 (alternative: robust non-structural)

fit = Blend(y,x,t,J,kn,degree,structural=FALSE) 

Example.3 (alternative: non-robust structural)

fit = Blend(y,x,t,J,kn,degree, robust=FALSE)

Example.4 (alternative: non-robust non-structural)

fit = Blend(y,x,t,J,kn,degree, robust=FALSE, structural=FALSE)   

Methods

This package provides implementation for methods proposed in

-Fan, K., Ren, J., Ma, Shuangge and Wu, C. (2025). robust Bayesian Regularized Semiparametric Mixed Models in Longitudinal Studies. (submitted).

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Version

Install

install.packages('Blend')

Version

0.1.1

License

GPL-2

Issues

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Maintainer

Kun Fan

Last Published

January 21st, 2025

Functions in Blend (0.1.1)

Blend-package

Robust Bayesian Longitudinal Regularized Semiparametric Mixed Model
plot_Blend

plot a Blend object
selection

Variable selection for a Blend object
Coverage

95% coverage for a Blend object with structural identification
data

simulated data for demonstrating the features of Blend
Blend

fit a robust Bayesian longitudinal regularized semi-parametric mixed model