plotHeatmap

Plot Heatmap for the IDER-based similarity matrix

A workflow of (a) meta-clustering based on
inter-group similarity measures and (b) a ground-truth-free test metric to
assess the biological correctness of integration in real datasets. See Hu Z,
Ahmed A, Yau C (2021) <doi:10.1101/2021.03.29.437525> for
more details.

Zhiyuan Hu

CIDER

Meta-Clustering for Single-Cell Data Integration and Evaluation

Christopher Yau

plotHeatmap function

<dl><dt>seu</dt>
<dd>An Seurat object.</dd>
<dt>ider</dt>
<dd>Output of function `getIDEr`.</dd></dl>

Arguments

Plot Heatmap for the IDER-based similarity matrix — plotHeatmap

<dl>

<dt>seu</dt>
<dd>An Seurat object.</dd>


<dt>ider</dt>
<dd>Output of function `getIDEr`.</dd>

</dl>

plotHeatmap: Plot Heatmap for the IDER-based similarity matrix

Description

Usage

Value

Arguments

See Also