gatherInitialClusters

Merge initial clustering results from a list of Seurat objects into a single Seurat object.

A workflow of (a) meta-clustering based on
inter-group similarity measures and (b) a ground-truth-free test metric to
assess the biological correctness of integration in real datasets. See Hu Z,
Ahmed A, Yau C (2021) <doi:10.1101/2021.03.29.437525> for
more details.

Zhiyuan Hu

CIDER

Meta-Clustering for scRNA-Seq Integration and Evaluation

Christopher Yau

Ahmed Ahmed

gatherInitialClusters function

<dl><dt>seu_list</dt>
<dd>A list containing Seurat objects with initial clustering results. Required.</dd>
<dt>seu</dt>
<dd>A Seurat object to which the merged initial cluster information will be added.</dd></dl>

Arguments

Gather Initial Cluster Names — gatherInitialClusters

<dl>

<dt>seu_list</dt>
<dd>A list containing Seurat objects with initial clustering results. Required.</dd>


<dt>seu</dt>
<dd>A Seurat object to which the merged initial cluster information will be added.</dd>

</dl>

gatherInitialClusters: Gather Initial Cluster Names

Description

Usage

Value

Arguments

See Also