pknnCMA-methods

pknnCMA,matrix,numeric,missing-method

pknnCMA,matrix,factor,missing-method

pknnCMA,data.frame,missing,formula-method

pknnCMA,ExpressionSet,character,missing-method


 Nearest neighbour variant that replaces the simple
  voting scheme by a weighted one (based on euclidean distances).
  This is also used to compute class probabilities.


multivariate

This package provides a comprehensive collection of various microarray-based classification algorithms
both from Machine Learning and Statistics.
Variable Selection, Hyperparameter tuning, Evaluation and Comparison can be performed
combined or stepwise in a user-friendly environment.

Christoph Bernau

Synthesis of microarray-based classification

pknnCMA-methods function

<dl> <dt>X = "matrix", y = "numeric", f = "missing"</dt><dd>signature 1</dd> <dt>X = "matrix", y = "factor", f = "missing"</dt><dd>signature 2</dd> <dt>X = "data.frame", y = "missing", f = "formula"</dt><dd>signature 3</dd> <dt>X = "ExpressionSet", y = "character", f = "missing"</dt><dd>signature 4</dd> </dl> For further argument and output information, consult
<code><a rd-options="" href="/link/pknnCMA?package=CMA&version=1.30.0" data-mini-rdoc="CMA::pknnCMA">pknnCMA</a>.</code>

Methods

Nearest neighbour variant that replaces the simple
  voting scheme by a weighted one (based on euclidean distances).
  This is also used to compute class probabilities.

pknnCMA-methods: Probabilistic nearest neighbours

Description

Arguments

Methods