NeveRegions


Breast cancer aCGH data called with CGHcall with default settings, containing 2621 features and 50 samples


datasets

This package contains example data sets with Copy Number Variants and imputed SNPs to be used by CNVassoc package.

Juan Gonzalez

CNVassocData

Example data sets for association analysis of CNV data

NeveRegions function

Format

 Neve RM, Chin K, Fridlyand J et al. A collection of breast cancer cell lines for the study of functionally distinct cancer subtypes. <em>Cancer Cell</em>, 10:515-527, 2006. Gonzalez JR, Subirana I, Escaramis G, Peraza S, Caceres A, Estivill X and Armengol L. Accounting for uncertainty when assessing association between copy number and disease: a latent class model. <em>BMC Bioinformatics</em>, 2009;10:172. 

NeveRegions: Breast Cancer aCGH data with CGHcall

Description

Usage

Arguments

Format

Source