Canopy (version 1.3.0)

getZ: To get SNA genotyping matrix \(Z\)

Description

To get SNA genotyping matrix \(Z\) from location of SNAs on the tree. Used in canopy.sample.

Usage

getZ(tree, sna.name)

Arguments

tree

input tree

sna.name

vector of SNA names

Value

Genotyping matrix \(Z\).

Examples

# NOT RUN {
data(MDA231_tree)
data(MDA231)
sna.name = rownames(MDA231$R)
getZ(MDA231_tree, sna.name)
# }