CellChat (version 1.0.0)

extractGeneSubsetFromPair: Extract the signaling gene names from ligand-receptor pairs

Description

Extract the signaling gene names from ligand-receptor pairs

Usage

extractGeneSubsetFromPair(
  pairLR,
  object = NULL,
  complex_input = NULL,
  geneInfo = NULL,
  combined = TRUE
)

Arguments

pairLR

data frame must contain columns named `ligand` and `receptor`

object

a CellChat object

complex_input

complex in CellChatDB databse

geneInfo

official gene symbol

combined

whether combining the ligand genes and receptor genes

Value