CellChat (version 1.0.0)

modify_vlnplot: modified vlnplot

Description

modified vlnplot

Usage

modify_vlnplot(
  object,
  features,
  idents = NULL,
  split.by = NULL,
  cols = NULL,
  show.text.y = TRUE,
  line.size = NULL,
  pt.size = 0,
  plot.margin = margin(0, 0, 0, 0, "cm"),
  ...
)

Arguments

object

Seurat object

features

Features to plot (gene expression, metrics)

idents

Which classes to include in the plot (default is all)

split.by

Name of a metadata column to split plot by;

cols

defining the color for each cell group

show.text.y

whther show y-axis text

line.size

line width in the violin plot

pt.size

size of the dots

plot.margin

adjust the white space between each plot

...

pass any arguments to VlnPlot in Seurat