fromNNMatrix


		A matrix containing integer valued indexes which represent items to be clustered. The index values contained in
		the matrix must be smaller than the number of rows in the matrix.
		Each row in the matrix represents one item and the columns are the nearest neighbors of that item.
	

data


	  The names for each row. The rownames of data will be used if not given.
	

names


	Converts a nearest neighbor matrix into a list that can be used with the jarvisPatrick function.


ChemmineR is a cheminformatics package for analyzing drug-like small molecule data in R. Its latest version contains functions for efficient processing of large numbers of molecules, physicochemical/structural property predictions, structural similarity searching, classification and clustering of compound libraries with a wide spectrum of algorithms. In addition, it offers visualization functions for compound clustering results and chemical structures.

Thomas Girke

ChemmineR

Cheminformatics Toolkit for R

fromNNMatrix function

A matrix containing integer valued indexes which represent items to be clustered. The index values contained in
		the matrix must be smaller than the number of rows in the matrix.
		Each row in the matrix represents one item and the columns are the nearest neighbors of that item.

The names for each row. The rownames of data will be used if not given.

Converts a nearest neighbor matrix into a list that can be used with the jarvisPatrick function.

fromNNMatrix: From Nearest Neighbor Matrix

Description

Usage

Arguments

Value

See Also

Examples