size_factors

A wrapper around <code>colData(cds)$Size_Factor</code>

Streamlining the clustering and visualization of time-series gene expression data from RNA-Seq experiments, this tool supports fuzzy c-means and k-means clustering algorithms. It is compatible with outputs from widely-used packages such as 'Seurat', 'Monocle', and 'WGCNA', enabling seamless downstream visualization and analysis. See Lokesh Kumar and Matthias E Futschik (2007) <doi:10.6026/97320630002005> for more details.

Junjun Lao

ClusterGVis

One-Step to Cluster and Visualize Gene Expression Data

Jun Zhang

size_factors function

<dl><dt>cds</dt>
<dd>A cell_data_set object.</dd></dl>

Arguments

Get the size factors from a cds object. — size_factors

<dl>

<dt>cds</dt>
<dd>A cell_data_set object.</dd>

</dl>

size_factors: Get the size factors from a cds object.

Description

Usage

Value

Arguments