Contour plot of the t distribution in S^2: Contour plot of the t distribution in \(S^2\)
Description
Contour plot of the t distribution in \(S^2\).
Usage
bivt.contour(x, type = "alr", n = 100, appear = TRUE, cont.line = FALSE)
Arguments
x
A matrix with compositional data. It has to be a 3 column matrix.
type
This is either "alr" or "ilr", corresponding to the additive and the isometric log-ratio transformation respectively.
n
The number of grid points to consider over which the density is calculated.
appear
Should the available data appear on the ternary plot (TRUE) or not (FALSE)?
cont.line
Do you want the contour lines to appear? If yes, set this TRUE.
Value
A ternary diagram with the points (if appear = TRUE) and the bivariate t contour lines.
Details
The alr or the ilr transformation is applied to the compositional data at first and the location, scatter and degrees
of freedom of the bivariate t distribution are computed. Then for a grid of points within the 2-dimensional simplex the
bivariate t density is calculated and the contours are plotted along with the points.
References
Aitchison J. (1986). The statistical analysis of compositional data. Chapman & Hall.