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CoxRidge (version 0.9.2)

Cox Models with Dynamic Ridge Penalties

Description

A package for fitting Cox models with penalized ridge-type partial likelihood. The package includes functions for fitting simple Cox models with all covariates controlled by a ridge penalty. The weight of the penalty is optimised by using a REML type-algorithm. Models with time varying effects of the covariates can also be fitted. Some of the covariates may be allowed to be fixed and thus not controlled by the penalty. There are three different penalty functions, ridge, dynamic and weighted dynamic. Time varying effects can be fitted without the need of an expanded dataset.

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Version

Install

install.packages('CoxRidge')

Monthly Downloads

27

Version

0.9.2

License

GPL (>= 2)

Last Published

February 27th, 2015

Functions in CoxRidge (0.9.2)

comp.graph

Plot a cox.ridge or cox.dynamic.ridge object.
Dynamic.Ridge

Fit a Cox model with time dependent effects of the covariates and penalized likelihood.
CoxRidge-package

Fit penalized Cox models with fixed and time varying effects of the covariates.
cox.ridge

Fit a Cox model with a ridge penalty on all covariates
print.cox.dynamic.ridge

Print a cox.dynamic.ridge object.
print.cox.ridge

Print a cox.ridge object.
ova

Ovarian cancer data set
CoxRidge internal

Internal CoxRidge functions.