finalizeSqlCyclopsData

object

Add an intercept covariate if one was not imported through SQL

addIntercept

Specify is a covariate should be used as an offset (fixed coefficient = 1).
Set option to <code>-1</code> to specify the time-to-event column,
otherwise include a single numeric or character covariate name.

useOffsetCovariate

Set to <code>TRUE</code> to indicate that offsets were log-transformed before importing into Cyclops data object.

offsetAlreadyOnLogScale

Sort covariates in numeric-order with intercept first if it exists.

sortCovariates

List of numeric or character covariates names to densely represent in Cyclops data object.
For efficiency, we suggest making atleast the intercept dense.

makeCovariatesDense


<code>finalizeSqlCyclopsData</code> finalizes a Cyclops data object


internal

This model fitting tool incorporates cyclic coordinate descent and
majorization-minimization approaches to fit a variety of regression models
found in large-scale observational healthcare data.  Implementations focus
on computational optimization and fine-scale parallelization to yield
efficient inference in massive datasets.

finalizeSqlCyclopsData: finalizeSqlCyclopsData

Description

Usage

Arguments