fitCyclopsSimulation: Fit simulated data
Description
fitCyclopsSimulation
fits simulated Cyclops data using Cyclops or a standard routine.
This function is useful for simulation studies comparing the performance of Cyclops when considering
large, sparse datasets.
Usage
fitCyclopsSimulation(sim, useCyclops = TRUE, model = "logistic", coverage = TRUE, includePenalty = FALSE)
Arguments
sim
A simulated Cyclops dataset generated via simulateCyclopsData
useCyclops
Logical: use Cyclops or a standard routine
model
String: Fitted regression model type
coverage
Logical: report coverage statistics
includePenalty
Logical: include regularized regression penalty in computing profile likelihood based confidence intervals