Cyclops (version 3.5.0)

getCyclopsProfileLogLikelihood: Profile likelihood for Cyclops model parameters

Description

getCyclopsProfileLogLikelihood evaluates the profile likelihood at a grid of parameter values.

Usage

getCyclopsProfileLogLikelihood(
  object,
  parm,
  x = NULL,
  bounds = NULL,
  tolerance = 0.001,
  initialGridSize = 10,
  maxResets = 10,
  includePenalty = TRUE,
  optimalWarmStart = TRUE
)

Value

A data frame containing the profile log likelihood. Returns NULL when the adaptive profiling fails to converge.

Arguments

object

Fitted Cyclops model object

parm

Specification of which parameter requires profiling, either a vector of numbers of covariateId names

x

Vector of values of the parameter

bounds

Pair of values to bound adaptive profiling

tolerance

Absolute tolerance allowed for adaptive profiling

initialGridSize

Initial grid size for adaptive profiling

maxResets

Maximum allowed number of recomputing the likelihood when coefficient drift is detected.

includePenalty

Logical: Include regularized covariate penalty in profile

optimalWarmStart

Logical: Use optimal warm-starting when parallelizing evaluations