mvTypePlot

A dataframe that contains quantitative data.

qData

A vector of the conditions (labels) (one label per sample).

labels

An integer for the intensity that delimits MNAR and 
MCAR missing values.

threshold


This method plots a scatter plot which represents the distribution of
missing values.
The colors correspond to the different conditions (slot Label in in the
dataset of class <code><a rd-options="" href="/link/MSnSet?package=DAPAR&version=1.4.7" data-mini-rdoc="DAPAR::MSnSet">MSnSet</a></code>).
The x-axis represent the mean of intensity for one condition and one
entity in the dataset (i. e. a protein) 
whereas the y-axis count the number of missing values for this entity
and the considered condition.
The data have been jittered for an easier vizualisation.


This package contains a collection of functions for the
visualisation and the statistical analysis of proteomic data.

Samuel Wieczorek

DAPAR

Tools for the Differential Analysis of Proteins Abundance with R

mvTypePlot function


This method plots a scatter plot which represents the distribution of
missing values.
The colors correspond to the different conditions (slot Label in in the
dataset of class <code><a rd-options='' href='MSnSet'>MSnSet</a></code>).
The x-axis represent the mean of intensity for one condition and one
entity in the dataset (i. e. a protein) 
whereas the y-axis count the number of missing values for this entity
and the considered condition.
The data have been jittered for an easier vizualisation.


mvTypePlot: Distribution of missing values with respect to intensity values

Description

Usage

Arguments

Value

Examples