DAPAR (version 1.4.7)

wrapper.diffAnaLimma: Performs differential analysis on an MSnSet object, calling the limma package functions

Description

Method to perform differential analysis on a MSnSet object (calls the limma package function).

Usage

wrapper.diffAnaLimma(obj, condition1, condition2)

Arguments

obj

An object of class MSnSet.

condition1

A vector that contains the names of the conditions considered as condition 1.

condition2

A vector that contains the names of the conditions considered as condition 2.

Value

A dataframe as returned by the limma package

Examples

data(UPSpep25)
condition1 <- '25fmol'
condition2 <- '10fmol'
wrapper.diffAnaLimma(UPSpep25, condition1, condition2)