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DAPAR (version 1.4.7)

wrapper.mvTypePlot: Distribution of missing values with respect to intensity values from a MSnSet object

Description

This method plots a scatter plot which represents the distribution of missing values. The colors correspond to the different conditions (slot Label in in the dataset of class MSnSet). The x-axis represent the mean of intensity for one condition and one entity in the dataset (i. e. a protein) whereas the y-axis count the number of missing values for this entity and the considered condition. The data have been jittered for an easier vizualisation.

Usage

wrapper.mvTypePlot(obj, threshold = 0)

Arguments

obj
An object of class MSnSet.
threshold
An integer for the intensity that delimits MNAR and MCAR missing values.

Value

A scatter plot

Examples

Run this code
data(UPSpep25)
wrapper.mvTypePlot(UPSpep25)

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