DESeq (version 1.24.0)

design: Accessors for the 'design' slot of a DESeqDataSet object.

Description

The design holds the R formula which expresses how the counts depend on the variables in colData. See DESeqDataSet for details.

Usage

## S3 method for class 'DESeqDataSet':
design(object)
## S3 method for class 'DESeqDataSet,formula':
design(object) <- value

Arguments

object

a DESeqDataSet object

value

a formula used for estimating dispersion and fitting Negative Binomial GLMs

Examples

dds <- makeExampleDESeqDataSet(m=4)
design(dds) <- formula(~ 1)