checkModel

The function checks if the fitted model is supported by DHARMa, and if there are other issues that could create problems.

internal

The 'DHARMa' package uses a simulation-based approach to create
readily interpretable scaled (quantile) residuals for fitted (generalized) linear mixed
models. Currently supported are linear and generalized linear (mixed) models from 'lme4'
(classes 'lmerMod', 'glmerMod'), 'glmmTMB', 'GLMMadaptive', and 'spaMM'; phylogenetic
linear models from 'phylolm' (classes 'phylolm' and 'phyloglm'); generalized additive
models ('gam' from 'mgcv'); 'glm' (including 'negbin' from 'MASS', but excluding quasi-distributions) and
'lm' model classes. Moreover, externally created simulations, e.g. posterior predictive simulations
from Bayesian software such as 'JAGS', 'STAN', or 'BUGS' can be processed as well.
The resulting residuals are standardized to values between 0 and 1 and can be interpreted
as intuitively as residuals from a linear regression. The package also provides a number of
plot and test functions for typical model misspecification problems, such as
over/underdispersion, zero-inflation, and residual spatial, phylogenetic and temporal autocorrelation.

Florian Hartig

DHARMa

Residual Diagnostics for Hierarchical (Multi-Level / Mixed)
Regression Models

Lukas Lohse

Melina de Souza leite

checkModel function

<dl><dt>fittedModel</dt>
<dd>a fitted model.</dd>
<dt>stop</dt>
<dd>whether to throw an error if the model is not supported by DHARMa.</dd></dl>

Arguments

Check if the fitted model is supported by DHARMa — checkModel

<dl>

<dt>fittedModel</dt>
<dd>a fitted model.</dd>


<dt>stop</dt>
<dd>whether to throw an error if the model is not supported by DHARMa.</dd>

</dl>

checkModel: Check if the fitted model is supported by DHARMa

Description

Usage

Arguments

Details