DLMtool (version 5.4.5)

genSizeCompWrap: Wrapper for C++ function to generate length composition

Description

And other internal related functions

Usage

genSizeCompWrap(
  i,
  vn,
  CAL_binsmid,
  retL,
  CAL_ESS,
  CAL_nsamp,
  Linfarray,
  Karray,
  t0array,
  LenCV,
  truncSD = 2
)
getfifth(lenvec, CAL_binsmid)

Arguments

i

Simulation number

vn

Array of vulnerable numbers

CAL_binsmid

Mid-points of CAL bins

retL

Array of retention-at-length

CAL_ESS

CAL effective sample size

CAL_nsamp

CAL sample size

Linfarray

Matrix of Linf

Karray

Matrix of K values

t0array

Matrix of t0 values

LenCV

Vector of LenCV

truncSD

Numeric. Number of standard deviations to truncate normal d distribution

lenvec

Vector of lengths

Value

Generated length composition from genSizeComp

Functions

• getfifth: Internal function to calculate fifth percentile of size composition