DOSE

DOSE-package


This package is designed to estimate DO-based semantic similarity
measurement and enrichment analysis.


package

This package implements five methods proposed by
Resnik, Schlicker, Jiang, Lin and Wang respectively
for measuring semantic similarities among DO terms and
gene products. Enrichment analyses including hypergeometric
model and gene set enrichment analysis are also implemented
for discovering disease associations of high-throughput
biological data.

Guangchuang Yu

Disease Ontology Semantic and Enrichment analysis

DOSE-package function

Disease Ontology Semantic and Enrichment analysis
Implemented five methods proposed by Resnik, Schlicker, Jiang, Lin and Wang respectively for measuring DO semantic similarities, and hypergeometric test for enrichment analysis.

DOSE-package: Disease Ontology Semantic and Enrichment analysis Implemented five methods proposed by Resnik, Schlicker, Jiang, Lin and Wang respectively for measuring DO semantic similarities, and hypergeometric test for enrichment analysis.

Description

Arguments

Details

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