analyse.noise.levels

<p>How many genes with high variance to examine</p>

num.high.psi

<p>Analyse noise levels and assess which genes have the greatest
ratio of temporal variance to noise. This are labelled as the
'gene.high.psi' genes.</p>

Implements the DeLorean model (Reid & Wernisch (2016)
<doi:10.1093/bioinformatics/btw372>) to estimate pseudotimes for
single cell expression data. The DeLorean model uses a Gaussian process
latent variable model to model uncertainty in the capture time of
cross-sectional data.

John Reid

DeLorean

Estimates Pseudotimes for Single Cell Expression Data

analyse.noise.levels function

Analyse noise levels and assess which genes have the greatest
ratio of temporal variance to noise. This are labelled as the
'gene.high.psi' genes. — analyse.noise.levels

analyse.noise.levels: Analyse noise levels and assess which genes have the greatest ratio of temporal variance to noise. This are labelled as the 'gene.high.psi' genes.

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