cov.calc.gene.conditioned

gene.idx

<p>Covariance function (defaults to cov.matern.32)</p>

cov.fn

<p>Calculate covariance for gene over test inputs when conditioned on
data at estimated pseudotimes.</p>

Implements the DeLorean model (Reid & Wernisch (2016)
<doi:10.1093/bioinformatics/btw372>) to estimate pseudotimes for
single cell expression data. The DeLorean model uses a Gaussian process
latent variable model to model uncertainty in the capture time of
cross-sectional data.

cov.calc.gene.conditioned: Calculate covariance for gene over test inputs when conditioned on data at estimated pseudotimes.

Description

Usage

Arguments