create.ordering.ll.fn

cov.fn

<p>Calculate the covariance structure of evenly spread tau and
create a function that calculates the log likelihood of
orderings.</p>

Implements the DeLorean model (Reid & Wernisch (2016)
<doi:10.1093/bioinformatics/btw372>) to estimate pseudotimes for
single cell expression data. The DeLorean model uses a Gaussian process
latent variable model to model uncertainty in the capture time of
cross-sectional data.

John Reid

create.ordering.ll.fn: Calculate the covariance structure of evenly spread tau and create a function that calculates the log likelihood of orderings.

Description

Usage

Arguments