gp.log.marg.like

The covariance matrix (kernel), not needed if U is provided.

Cholesky decomposition of K (chol(K)).

The log marginal likelihood. See "2.3 Varying the Hyperparameters"
on page 19 of Rasmussen and Williams' book.

Implements the DeLorean model (Reid & Wernisch (2016)
<doi:10.1093/bioinformatics/btw372>) to estimate pseudotimes for
single cell expression data. The DeLorean model uses a Gaussian process
latent variable model to model uncertainty in the capture time of
cross-sectional data.

John Reid

gp.log.marg.like: The log marginal likelihood. See "2.3 Varying the Hyperparameters" on page 19 of Rasmussen and Williams' book.

Description

Usage

Arguments