knit.report

<p>The name of the report. Used to locate the R
markdown report file in the package.</p>

report.name

<p>Knit a report, the file inst/Rmd/&lt;report.name&gt;.Rmd must exist in
the package directory.</p>

Implements the DeLorean model (Reid & Wernisch (2016)
<doi:10.1093/bioinformatics/btw372>) to estimate pseudotimes for
single cell expression data. The DeLorean model uses a Gaussian process
latent variable model to model uncertainty in the capture time of
cross-sectional data.

John Reid

knit.report: Knit a report, the file inst/Rmd/<report.name>.Rmd must exist in the package directory.

Description

Usage

Arguments