permute.df

<p>Name of an ordered factor that the permutation
should respect.</p>

group.col

<p>Permute a data frame, x. If group.col is given it should name an ordered
factor that the order of the permutation should respect.</p>

Implements the DeLorean model (Reid & Wernisch (2016)
<doi:10.1093/bioinformatics/btw372>) to estimate pseudotimes for
single cell expression data. The DeLorean model uses a Gaussian process
latent variable model to model uncertainty in the capture time of
cross-sectional data.

John Reid

permute.df: Permute a data frame, x. If group.col is given it should name an ordered factor that the order of the permutation should respect.

Description

Usage

Arguments