permuted.roughness

<p>The expression matrix of the held out genes</p>

expr.held.out

<p>Permute cells and test roughness of expression.</p>

Implements the DeLorean model (Reid & Wernisch (2016)
<doi:10.1093/bioinformatics/btw372>) to estimate pseudotimes for
single cell expression data. The DeLorean model uses a Gaussian process
latent variable model to model uncertainty in the capture time of
cross-sectional data.

John Reid

permuted.roughness: Permute cells and test roughness of expression.

Description

Usage

Arguments