process.posterior

<p>Process the posterior, that is extract and reformat the samples from
Stan. We also determine which sample has the highest likelihood, this
is labelled as the 'best' sample.</p>

Implements the DeLorean model (Reid & Wernisch (2016)
<doi:10.1093/bioinformatics/btw372>) to estimate pseudotimes for
single cell expression data. The DeLorean model uses a Gaussian process
latent variable model to model uncertainty in the capture time of
cross-sectional data.

John Reid

DeLorean

Estimates Pseudotimes for Single Cell Expression Data

process.posterior function

Process the posterior, that is extract and reformat the samples from
Stan. We also determine which sample has the highest likelihood, this
is labelled as the 'best' sample. — process.posterior

Process the posterior, that is extract and reformat the samples from
Stan. We also determine which sample has the highest likelihood, this
is labelled as the 'best' sample.

process.posterior: Process the posterior, that is extract and reformat the samples from Stan. We also determine which sample has the highest likelihood, this is labelled as the 'best' sample.

Description

Usage

Arguments