# NOT RUN {
set.seed(123)
##########################################################
### "ONE-SHOT" EI-MAXIMIZATION OF THE BRANIN FUNCTION ####
### KNOWN AT A 9-POINTS FACTORIAL DESIGN ####
##########################################################
# a 9-points factorial design, and the corresponding response
d <- 2
n <- 9
design.fact <- expand.grid(seq(0,1,length=3), seq(0,1,length=3))
names(design.fact) <- c("x1", "x2")
design.fact <- data.frame(design.fact)
names(design.fact) <- c("x1", "x2")
response.branin <- apply(design.fact, 1, branin)
response.branin <- data.frame(response.branin)
names(response.branin) <- "y"
# model identification
fitted.model1 <- km(~1, design=design.fact, response=response.branin,
covtype="gauss", control=list(pop.size=50,trace=FALSE), parinit=c(0.5, 0.5))
# EGO one step
library(rgenoud)
lower <- rep(0,d)
upper <- rep(1,d) # domain for Branin function
oEGO <- max_EI(fitted.model1, lower=lower, upper=upper,
control=list(pop.size=20, BFGSburnin=2))
print(oEGO)
# graphics
n.grid <- 20
x.grid <- y.grid <- seq(0,1,length=n.grid)
design.grid <- expand.grid(x.grid, y.grid)
response.grid <- apply(design.grid, 1, branin)
z.grid <- matrix(response.grid, n.grid, n.grid)
contour(x.grid,y.grid,z.grid,40)
title("Branin Function")
points(design.fact[,1], design.fact[,2], pch=17, col="blue")
points(oEGO$par[1], oEGO$par[2], pch=19, col="red")
#############################################################
### "ONE-SHOT" EI-MAXIMIZATION OF THE CAMELBACK FUNCTION ####
### KNOWN AT A 16-POINTS FACTORIAL DESIGN ####
#############################################################
# }
# NOT RUN {
# a 16-points factorial design, and the corresponding response
d <- 2
n <- 16
design.fact <- expand.grid(seq(0,1,length=4), seq(0,1,length=4))
names(design.fact)<-c("x1", "x2")
design.fact <- data.frame(design.fact)
names(design.fact) <- c("x1", "x2")
response.camelback <- apply(design.fact, 1, camelback)
response.camelback <- data.frame(response.camelback)
names(response.camelback) <- "y"
# model identification
fitted.model1 <- km(~1, design=design.fact, response=response.camelback,
covtype="gauss", control=list(pop.size=50,trace=FALSE), parinit=c(0.5, 0.5))
# EI maximization
library(rgenoud)
lower <- rep(0,d)
upper <- rep(1,d)
oEGO <- max_EI(fitted.model1, lower=lower, upper=upper,
control=list(pop.size=20, BFGSburnin=2))
print(oEGO)
# graphics
n.grid <- 20
x.grid <- y.grid <- seq(0,1,length=n.grid)
design.grid <- expand.grid(x.grid, y.grid)
response.grid <- apply(design.grid, 1, camelback)
z.grid <- matrix(response.grid, n.grid, n.grid)
contour(x.grid,y.grid,z.grid,40)
title("Camelback Function")
points(design.fact[,1], design.fact[,2], pch=17, col="blue")
points(oEGO$par[1], oEGO$par[2], pch=19, col="red")
# }
# NOT RUN {
####################################################################
### "ONE-SHOT" EI-MAXIMIZATION OF THE GOLDSTEIN-PRICE FUNCTION #####
### KNOWN AT A 9-POINTS FACTORIAL DESIGN #####
####################################################################
# }
# NOT RUN {
# a 9-points factorial design, and the corresponding response
d <- 2
n <- 9
design.fact <- expand.grid(seq(0,1,length=3), seq(0,1,length=3))
names(design.fact)<-c("x1", "x2")
design.fact <- data.frame(design.fact)
names(design.fact)<-c("x1", "x2")
response.goldsteinPrice <- apply(design.fact, 1, goldsteinPrice)
response.goldsteinPrice <- data.frame(response.goldsteinPrice)
names(response.goldsteinPrice) <- "y"
# model identification
fitted.model1 <- km(~1, design=design.fact, response=response.goldsteinPrice,
covtype="gauss", control=list(pop.size=50, max.generations=50,
wait.generations=5, BFGSburnin=10, trace=FALSE), parinit=c(0.5, 0.5), optim.method="gen")
# EI maximization
library(rgenoud)
lower <- rep(0,d); upper <- rep(1,d); # domain for Branin function
oEGO <- max_EI(fitted.model1, lower=lower, upper=upper, control
=list(pop.size=50, max.generations=50, wait.generations=5, BFGSburnin=10))
print(oEGO)
# graphics
n.grid <- 20
x.grid <- y.grid <- seq(0,1,length=n.grid)
design.grid <- expand.grid(x.grid, y.grid)
response.grid <- apply(design.grid, 1, goldsteinPrice)
z.grid <- matrix(response.grid, n.grid, n.grid)
contour(x.grid,y.grid,z.grid,40)
title("Goldstein-Price Function")
points(design.fact[,1], design.fact[,2], pch=17, col="blue")
points(oEGO$par[1], oEGO$par[2], pch=19, col="red")
# }
# NOT RUN {
# }
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