DrugClust (version 0.2)

DrugClustPAM: DrugClustPAM

Description

Function Implementing DrugClust with PAM algorithm

Usage

DrugClustPAM(num_folds, num_clusters, num_iterations, features, side_effects)

Arguments

num_folds

number of folds

num_clusters

number of clusters

num_iterations

number of iterations

features

features matrix

side_effects

side_effects matrix

Value

(list(AUCFinal,AUPRFinal)) first value is the mean AUC on the various folders, second value is the mean AUPR on the various folders

Examples

# num_folds=3
# num_clusters=4
# num_iterations= 5
#features is the features matrix (see InitFeatures function)
# side effects is the matrix containing side effects (see InitSideEffects function)
#result<-DrugClustPAM(num_folds,num_clusters,num_iterations,features,side_effects)