EBSeqHMM (version 1.6.0)

PlotExp: Plot expression of a single gene

Description

Plot expression of a single gene

Usage

PlotExp(NormalizedData, Conditions, Name)

Arguments

NormalizedData

Expression data after adjusting for library size factors

Conditions

sample conditions

Name

name of the gene/isoform of interest

Value

PlotExp() funtion will generate line plots for genes or isoforms of interest.

Details

PlotExp() function will generate line plots for genes or isoforms of interest.

Examples

data(GeneExampleData)
CondVector <- rep(paste("t",1:5,sep=""),each=3)
Conditions <- factor(CondVector, levels=c("t1","t2","t3","t4","t5"))
Sizes <- MedianNorm(GeneExampleData)
NormData <- GetNormalizedMat(GeneExampleData, Sizes)
PlotExp(NormData, Conditions, "Gene_1")