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EEM (version 1.1.1)

Read and Preprocess Fluorescence Excitation-Emission Matrix (EEM) Data

Description

Read raw EEM data and prepares them for further analysis.

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Version

Install

install.packages('EEM')

Monthly Downloads

192

Version

1.1.1

License

GPL-3

Issues

2

Pull Requests

1

Stars

8

Forks

5

Maintainer

Vipavee Trivittayasil

Last Published

April 21st, 2016

Functions in EEM (1.1.1)

plotScore

Plot score for prcomp result
drawEEMgg

Draw contour for EEM data using ggplot2
plotLoading

Plot loadings for EEM data
findLocalMax

Find local maximum peaks
commonizeEEM

Smooth out the different dimensions of EEM data
drawEEM

Draw contour for EEM data
fold

Fold EEM matrix into a list
EEM

EEM: A package for reading and preprocessing fluorescence excitation-emission matrix
readEEM

Read raw files and return a list
summary.EEM

SummarizeEEM EEM list
applejuice

Apple juice
cutEEM

Cut portions of EEM
unfold

Unfold EEM list into a matrix
EEM-misc

Internal functions for EEM package
prcompname

Create name for prcomp result
plotReg

Plot regression coefficients for EEM data
[.EEM

Subset EEM list
normalize

Normalize data
gluten

Gluten
plotScorem

Plot score matrix for prcomp result based on group
delScattering

Delete scattering rays
delScattering2

Delete scattering rays
print.EEM

Print EEM
extract

Extract values from other models