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EFDR (version 1.3)

Wavelet-Based Enhanced FDR for Detecting Signals from Complete or Incomplete Spatially Aggregated Data

Description

Enhanced False Discovery Rate (EFDR) is a tool to detect anomalies in an image. The image is first transformed into the wavelet domain in order to decorrelate any noise components, following which the coefficients at each resolution are standardised. Statistical tests (in a multiple hypothesis testing setting) are then carried out to find the anomalies. The power of EFDR exceeds that of standard FDR, which would carry out tests on every wavelet coefficient: EFDR choose which wavelets to test based on a criterion described in Shen et al. (2002). The package also provides elementary tools to interpolate spatially irregular data onto a grid of the required size. The work is based on Shen, X., Huang, H.-C., and Cressie, N. 'Nonparametric hypothesis testing for a spatial signal.' Journal of the American Statistical Association 97.460 (2002): 1122-1140.

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Install

install.packages('EFDR')

Monthly Downloads

224

Version

1.3

License

GPL (>= 2)

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Last Published

August 22nd, 2023

Functions in EFDR (1.3)

nei.efdr

Find wavelet neighbourhood
regrid

Regrid ir/regular data
df.to.mat

Change xyz data-frame into a Z image
test_image

Create a test image
EFDR-package

Wavelet-Based Enhanced FDR for Signal Detection in Noisy Images
test.efdr.condsim

Test for anomalies in wavelet space via conditional simulation
fdrpower

Power function
diagnostic.table

2x2 diagnostic table
wavelet-test

Test for anomalies in wavelet space
wav_th

Indices of wavelets exceeding a given threshold