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EGAnet (version 2.2.0)

Exploratory Graph Analysis – a Framework for Estimating the Number of Dimensions in Multivariate Data using Network Psychometrics

Description

Implements the Exploratory Graph Analysis (EGA) framework for dimensionality and psychometric assessment. EGA estimates the number of dimensions in psychological data using network estimation methods and community detection algorithms. A bootstrap method is provided to assess the stability of dimensions and items. Fit is evaluated using the Entropy Fit family of indices. Unique Variable Analysis evaluates the extent to which items are locally dependent (or redundant). Network loadings provide similar information to factor loadings and can be used to compute network scores. A bootstrap and permutation approach are available to assess configural and metric invariance. Hierarchical structures can be detected using Hierarchical EGA. Time series and intensive longitudinal data can be analyzed using Dynamic EGA, supporting individual, group, and population level assessments.

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Version

Install

install.packages('EGAnet')

Monthly Downloads

3,309

Version

2.2.0

License

AGPL (>= 3.0)

Maintainer

Hudson Golino

Last Published

March 7th, 2025

Functions in EGAnet (2.2.0)

CFA

CFA Fit of EGA or hierEGA Structure
Embed

Time-delay Embedding
EGA.fit

EGA Optimal Model Fit using the Total Entropy Fit Index (tefi)
EGM.compare

Compare EGM with EFA
EGM

Exploratory Graph Model
EGA.estimate

Estimates EGA for Multidimensional Structures
EGAnet-package

EGAnet-package
EGAnet-plot

S3 Plot Methods for EGAnet
EGA

Exploratory Graph Analysis
EBICglasso.qgraph

EBICglasso from qgraph 1.4.4
boot.ergoInfo

Bootstrap Test for the Ergodicity Information Index
bootEGA

Bootstrap Exploratory Graph Analysis
community.consensus

Applies the Consensus Clustering Method (Louvain only)
color_palette_EGA

EGA Color Palettes
boot.wmt

bootEGA Results of wmt2Data
LCT

Loadings Comparison Test
auto.correlate

Automatic correlations
UVA

Unique Variable Analysis
community.compare

Compares Community Detection Solutions Using Permutation
TMFG

Triangulated Maximally Filtered Graph
community.unidimensional

Approaches to Detect Unidimensional Communities
dimensionStability

Dimension Stability Statistics from bootEGA
convert2tidygraph

Convert networks to tidygraph
convert2igraph

Convert networks to igraph
community.detection

Apply a Community Detection Algorithm
community.homogenize

Homogenize Community Memberships
dnn.weights

Loadings Comparison Test Deep Learning Neural Network Weights
compare.EGA.plots

Visually Compare Two or More EGAnet plots
cosine

Cosine similarity
entropyFit

Entropy Fit Index
glla

Generalized Local Linear Approximation
ega.wmt

EGA Network of wmt2Data
hierEGA

Hierarchical EGA
genTEFI

Generalized Total Entropy Fit Index using Von Neumman's entropy (Quantum Information Theory) for correlation matrices
depression

Depression Data
igraph2matrix

Convert network to matrix
dynEGA

Dynamic Exploratory Graph Analysis
dynEGA.ind.pop

Intra- and Inter-individual dynEGA
frobenius

Frobenius Norm (Similarity)
ergoInfo

Ergodicity Information Index
information

Information Theory Metrics
invariance

Measurement Invariance of EGA Structure
intelligenceBattery

Intelligence Data
infoCluster

Information Theoretic Mixture Clustering for dynEGA
jsd

Jensen-Shannon Distance
modularity

Computes the (Signed) Modularity Statistic
net.scores

Network Scores
itemStability

Item Stability Statistics from bootEGA
simDFM

Simulate data following a Dynamic Factor Model
simEGM

Simulate data following a Exploratory Graph Model (EGM)
sim.dynEGA

sim.dynEGA Data
network.compare

Compares Network Structures Using Permutation
network.predictability

Predict New Data based on Network
optimism

Optimism Data
net.loads

Network Loadings
polychoric.matrix

Computes Polychoric Correlations
riEGA

Random-Intercept EGA
network.nonconvex

GLASSO with Non-convex Penalties
prime.num

Prime Numbers through 100,000
network.estimation

Apply a Network Estimation Method
wto

Weighted Topological Overlap
totalCor

Total Correlation
vn.entropy

Entropy Fit Index using Von Neumman's entropy (Quantum Information Theory) for correlation matrices
tefi

Total Entropy Fit Index using Von Neumman's entropy (Quantum Information Theory) for correlation matrices
wmt2

WMT-2 Data
totalCorMat

Total Correlation Matrix
tefi.compare

Compare Total Entropy Fit Index (tefi) Between Two Structures