maxnet.predictRaster

As maxnet does not have native functionality for making 
prediction rasters, this function does it. It is a wrapper for the internal
enm.maxnet@predict function, which is not really intended for use outside
the package.

Runs ecological niche models over all combinations of user-defined settings (i.e., tuning), performs cross validation to evaluate models, and returns data tables to aid in selection of optimal model settings that balance goodness-of-fit and model complexity. Also has functions to partition data spatially (or not) for cross validation, to plot multiple visualizations of results, to run null models to estimate significance and effect sizes of performance metrics, and to calculate range overlap between model predictions, among others. The package was originally built for Maxent models (Phillips et al. 2006, Phillips et al. 2017), but the current version allows possible extensions for any modeling algorithm. The extensive vignette, which guides users through most package functionality but unfortunately has a file size too big for CRAN, can be found here on the package's Github Pages website: <https://jamiemkass.github.io/ENMeval/articles/ENMeval-2.0-vignette.html>.

Jamie M. Kass

ENMeval

Automated Tuning and Evaluations of Ecological Niche Models

Robert Muscarella

Peter J. Galante

Corentin Bohl

Gonzalo E. Buitrago-Pinilla

Robert A. Boria

Mariano Soley-Guardia

Robert P. Anderson

maxnet.predictRaster function

<dl><dt>mod</dt>
<dd>maxnet object</dd>
<dt>envs</dt>
<dd>SpatRaster</dd>
<dt>pred.type</dt>
<dd>character: the type of maxnet prediction to make; the default
is "cloglog"</dd>
<dt>doClamp</dt>
<dd>Boolean: whether to clamp predictions or not</dd>
<dt>...</dt>
<dd>any additional parameters</dd></dl>

Arguments

Predict raster for maxnet — maxnet.predictRaster

<dl>

<dt>mod</dt>
<dd>maxnet object</dd>


<dt>envs</dt>
<dd>SpatRaster</dd>


<dt>pred.type</dt>
<dd>character: the type of maxnet prediction to make; the default
is "cloglog"</dd>


<dt>doClamp</dt>
<dd>Boolean: whether to clamp predictions or not</dd>


<dt>...</dt>
<dd>any additional parameters</dd>

</dl>

maxnet.predictRaster: Predict raster for maxnet

Description

Usage

Arguments