IDgenotypeGeneration

Generation of the input genotype ID, i.e. the concatenation in string form
of the names of the alleles constituting these haplotypes (the two from
the diploid genome and the one from the haploid genome).

Implementation in a simple and efficient way of fully customisable population genetics simulations,
considering multiple loci that have epistatic interactions. Specifically suited to the modelling of
multilocus nucleocytoplasmic systems (with both diploid and haploid loci), it is nevertheless possible
to simulate purely diploid (or purely haploid) genetic models.
Examples of models that can be simulated with Ease are numerous, for example models of genetic
incompatibilities as presented by Marie-Orleach et al. (2022) <doi:10.1101/2022.07.25.501356>.
Many others are conceivable, although few are actually explored, Ease having been developed
in particular to provide a solution so that these kinds of models can be simulated simply.

Ehouarn Faou

Ease

Simulating Explicit Population Genetics Models

IDgenotypeGeneration function

<dl><dt>dl1</dt>
<dd>the first diploid haplotype as a character (or factors) vector.</dd>
<dt>dl2</dt>
<dd>the second diploid haplotype as a character (or factors) vector.</dd>
<dt>hl</dt>
<dd>the haploid haplotype as a character (or factors) vector.</dd></dl>

Arguments

Author

Genotype identifier — IDgenotypeGeneration

<dl>

<dt>dl1</dt>
<dd>the first diploid haplotype as a character (or factors) vector.</dd>


<dt>dl2</dt>
<dd>the second diploid haplotype as a character (or factors) vector.</dd>


<dt>hl</dt>
<dd>the haploid haplotype as a character (or factors) vector.</dd>

</dl>

IDgenotypeGeneration: Genotype identifier

Description

Usage

Value

Arguments

Author