Generation of genotypes associated with a Genome object.
Usage
genotyping(genomeObj)
Value
A list of matrices describing genotypes in rows.
Arguments
genomeObj
a Genome object.
Author
Ehouarn Le Faou
Details
The output genotypes are described as a list of three matrices. A
genotype consists of two diploid haplotypes (first two matrices)
and one haploid haplotype (third matrix), which are read at the
same row number on all three matrices.