mutMatFriendly

Translation of the list of individually defined mutations into allelic
mutation matrices which are then used to generate the genotypic mutation
matrix.

Implementation in a simple and efficient way of fully customisable population genetics simulations,
considering multiple loci that have epistatic interactions. Specifically suited to the modelling of
multilocus nucleocytoplasmic systems (with both diploid and haploid loci), it is nevertheless possible
to simulate purely diploid (or purely haploid) genetic models.
Examples of models that can be simulated with Ease are numerous, for example models of genetic
incompatibilities as presented by Marie-Orleach et al. (2022) <doi:10.1101/2022.07.25.501356>.
Many others are conceivable, although few are actually explored, Ease having been developed
in particular to provide a solution so that these kinds of models can be simulated simply.

Ehouarn Faou

Ease

Simulating Explicit Population Genetics Models

mutMatFriendly function

<dl><dt>genomeObj</dt>
<dd>a <code>Genome</code> object</dd>
<dt>mutations</dt>
<dd>list of mutations defined individually with the function
mutation</dd></dl>

Arguments

Author

Individual mutation definition to allelic mutation matrices — mutMatFriendly

<dl>

<dt>genomeObj</dt>
<dd>a <code>Genome</code> object</dd>


<dt>mutations</dt>
<dd>list of mutations defined individually with the function
mutation</dd>

</dl>

mutMatFriendly: Individual mutation definition to allelic mutation matrices

Description

Usage

Value

Arguments

Author