saveout.icm

This function transfers the data from the main <code>icm_dat</code>
class data object to the output <code>out</code> object at the end of
each simulation in <code>icm</code>.

internal

Tools for simulating mathematical models of infectious disease dynamics.
Epidemic model classes include deterministic compartmental models, stochastic
individual-contact models, and stochastic network models. Network models use the
robust statistical methods of exponential-family random graph models (ERGMs)
from the Statnet suite of software packages in R. Standard templates for epidemic
modeling include SI, SIR, and SIS disease types. EpiModel features an API for
extending these templates to address novel scientific research aims. Full
methods for EpiModel are detailed in Jenness et al. (2018, <doi:10.18637/jss.v084.i08>).

Samuel Jenness

EpiModel

Mathematical Modeling of Infectious Disease Dynamics

Steven M. Goodreau

Martina Morris

Adrien Le Guillou

Chad Klumb

Skye Bender-deMoll

saveout.icm function

<dl><dt>dat</dt>
<dd>Main <code>icm_dat</code> class data object passed through <code>icm</code>
simulations.</dd>
<dt>s</dt>
<dd>Current simulation number.</dd>
<dt>out</dt>
<dd>Out list passed back in for updating at simulations 2+.</dd></dl>

Arguments

Save icm Data to Output List Format — saveout.icm

<dl>

<dt>dat</dt>
<dd>Main <code>icm_dat</code> class data object passed through <code>icm</code>
simulations.</dd>


<dt>s</dt>
<dd>Current simulation number.</dd>


<dt>out</dt>
<dd>Out list passed back in for updating at simulations 2+.</dd>

</dl>

saveout.icm: Save icm Data to Output List Format

Description

Usage

Value

Arguments