use_scenario

Apply a scenario object to a param.net object

Tools for simulating mathematical models of infectious disease dynamics.
Epidemic model classes include deterministic compartmental models, stochastic
individual-contact models, and stochastic network models. Network models use the
robust statistical methods of exponential-family random graph models (ERGMs)
from the Statnet suite of software packages in R. Standard templates for epidemic
modeling include SI, SIR, and SIS disease types. EpiModel features an API for
extending these templates to address novel scientific research aims. Full
methods for EpiModel are detailed in Jenness et al. (2018, <doi:10.18637/jss.v084.i08>).

Samuel Jenness

EpiModel

Mathematical Modeling of Infectious Disease Dynamics

Steven M. Goodreau

Martina Morris

Adrien Le Guillou

Chad Klumb

Skye Bender-deMoll

use_scenario function

<dl><dt>param</dt>
<dd>Object of class <code>param.net</code>, output from function of same
name.</dd>
<dt>scenario</dt>
<dd>a scenario object usually created from a <code>data.frame</code> of
scenarios using the <code>create_scenario_list</code> function. See the vignette
"network-model-scenarios".</dd></dl>

Arguments

A scenario is a list containing an "id" field, the name of the scenario and
a ".param.updater.list" containing a list of updaters that modifies the
parameters of the model at given time steps. If a scenario contains a
parameter not defined in the <code>param</code> object, an error will be produced.
See the vignette "model-parameters" for the technical detail of their
implementation.

scenario

Apply a scenario object to a param.net object — use_scenario

<dl>

<dt>param</dt>
<dd>Object of class <code>param.net</code>, output from function of same
name.</dd>


<dt>scenario</dt>
<dd>a scenario object usually created from a <code>data.frame</code> of
scenarios using the <code>create_scenario_list</code> function. See the vignette
"network-model-scenarios".</dd>

</dl>

A scenario is a list containing an "id" field, the name of the scenario and
a ".param.updater.list" containing a list of updaters that modifies the
parameters of the model at given time steps. If a scenario contains a
parameter not defined in the <code>param</code> object, an error will be produced.
See the vignette "model-parameters" for the technical detail of their
implementation.

use_scenario: Apply a scenario object to a param.net object

Description

Usage

Value

Arguments

scenario