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FADA (version 1.3.5)

Variable Selection for Supervised Classification in High Dimension

Description

The functions provided in the FADA (Factor Adjusted Discriminant Analysis) package aim at performing supervised classification of high-dimensional and correlated profiles. The procedure combines a decorrelation step based on a factor modeling of the dependence among covariates and a classification method. The available methods are Lasso regularized logistic model (see Friedman et al. (2010)), sparse linear discriminant analysis (see Clemmensen et al. (2011)), shrinkage linear and diagonal discriminant analysis (see M. Ahdesmaki et al. (2010)). More methods of classification can be used on the decorrelated data provided by the package FADA.

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Install

install.packages('FADA')

Monthly Downloads

196

Version

1.3.5

License

GPL (>= 2)

Maintainer

Last Published

December 10th, 2019

Functions in FADA (1.3.5)

decorrelate.test

Factor Adjusted Discriminant Analysis 2: Decorrelation of a testing data set after running the decorrelate.train function on a training data set
FADA

Factor Adjusted Discriminant Analysis 3-4 : Supervised classification on decorrelated data
FADA-package

Variable selection for supervised classification in high dimension
data.train

Training data
data.test

Test dataset simulated with the same distribution as the training dataset data.train.
decorrelate.train

Factor Adjusted Discriminant Analysis 1: Decorrelation of the training data