FindMyFriends (version 1.2.2)

hasParalogueLinks: Checks whether linking of paralogues has been done

Description

This method checks for the existance of paralogue links in the object.

Usage

hasParalogueLinks(object)
"hasParalogueLinks"(object)

Arguments

object

A pgVirtual subclass

Value

A boolean indicating whether paralogue links have been defined (TRUE) or not (FALSE)

Methods (by class)

• pgVirtual: Check for secondary gene grouping in pgVirtual subclasses

Examples

# No paralogues
testPG <- .loadPgExample(withGroups=TRUE)
hasParalogueLinks(testPG)

# With paralogues
testPG <- .loadPgExample(withGroups=TRUE, withParalogues=TRUE)
hasParalogueLinks(testPG)