FindMyFriends (version 1.2.2)

readAnnot: Import annotation from an .annot file

Description

This function makes it easy to import annotation create in Blast2GO or other programs supporting .annot exporting of results.

Usage

readAnnot(file)

Arguments

file

The .annot file to import

Value

A data.frame ready to merge with a pangenome object using addGroupInfo with the key argument set to 'name'.

Examples

# Get path to file
annot <- system.file('extdata', 'examplePG', 'example.annot', package='FindMyFriends')

# Parse the file
readAnnot(annot)