Usage
TvTi_buildMain(x, y = NULL, type = "Proportion", label_x_axis = TRUE, x_axis_text_angle = 45, palette = c("#D53E4F", "#FC8D59", "#FEE08B", "#E6F598", "#99D594", "#3288BD"), plot_expected = FALSE, tvti.layers = NULL, expec.layers = NULL, title_x_axis = TRUE)
Arguments
x
Object of class data frame containing columns 'trans_tranv',
'sample', 'Freq', and 'Prop'
y
Object of class data frame containing columns 'Prop', 'trans_tranv'
for display of expected results
type
Object of class character specifying whether to plot the
Proportion or Frequency, one of "Prop"
label_x_axis
boolean specifying wheter to label x axis
x_axis_text_angle
Integer specifying the angle to labels on x_axis
palette
Character vector of length 6 specifying colors for
trans/tranv type
plot_expected
Boolean specifying if this is the main TvTi plot or a
sub plot for expected values
tvti.layers
Additional ggplot2 layers for the main plot
expec.layers
Additional ggplot2 layers for the expected values plot
title_x_axis
boolean specifying whether to display an x axis title