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GenVisR (version 1.0.4)

covBars_buildMain: Construct coverage cohort plot

Description

given a data frame construct a plot to display coverage as percentage bars for a group of samples

Usage

covBars_buildMain(data_frame, col, plot_title = NULL, x_lab_size = 12, y_lab_size = 12, facet_lab_size = 10, layers = NULL)

Arguments

data_frame
object of class data frame containing columns depth, sample, bp
col
vector of colors for the coverage bars
plot_title
character string for title of plot
x_lab_size
integer specifying the size of the X label
y_lab_size
integer specifying the size of the Y label
facet_lab_size
integer specifying the size of the faceted labels
layers
Additional layers to be plotted, can be a theme but must be a ggplot layer

Value

ggplot object